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Intron Name: Anas_platyrhynchos_platyrhynchos_14_2169210_2171858_F

Intron Information:

Intron Rank:

132073

Intron Class:

major

Intron Phase:

Intron Coordinates:

2169210 - 2171858

Intron Length:

2649

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAGGTTTT

5'SS Class:

strong_major

3'SS Sequence:

TTTCTCCTCTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTGAT

U12 Branch Point Sequence:

TTCTCCTCTAAG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.4

0.74

80.5

34.9

Major BPS

0.85

0.9

39.9

Major PPT

0.56

79.6

26.3

Minor 5ss

44.9

-0.5

3.2

63.2

43.8

Minor BPS

-0.2

2.1

61.15

46.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020961

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030534

2168981 - 2174641

5661