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Intron Name: Anas_platyrhynchos_platyrhynchos_14_246322_248173_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

246322 - 248173

Intron Length:

1852

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTA|GTAAGAACC

5'SS Class:

major

3'SS Sequence:

CTTCTCGTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCCGAC

U12 Branch Point Sequence:

TGGTGCCGACGC

Flanking Amino Acid:

LAPEVDELSLLKKLLLSPSH

Intron Amino Acid Position:

158

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.6

0.56

35.2

Major BPS

47.5

-0.1

1.3

43.8

40.8

Major PPT

82.1

0.72

0.8

76.4

32.2

Minor 5ss

36.6

-1.5

2.9

47.2

35.8

Minor BPS

34.6

-1.1

2.3

44.32

43.4

Associated Gene:

Gene:

PPARGC1B

Ensembl Gene ID:

ENSAPLG00000009977

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046651

230173 - 255731

25559

ENSAPLT00000010401

216171 - 255918

39748