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Intron Name: Anas_platyrhynchos_platyrhynchos_14_246322_248703_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

246322 - 248703

Intron Length:

2382

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTA|GTAAGAACC

5'SS Class:

major

3'SS Sequence:

CTTCTCTCCCAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCACCAT

U12 Branch Point Sequence:

GGCTCACCATCT

Flanking Amino Acid:

LAPEVDELSLVEAPRDRRAS

Intron Amino Acid Position:

158

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.6

0.56

35.2

Major BPS

0.08

1.4

42.7

Major PPT

69.1

0.43

67.6

32.7

Minor 5ss

36.6

-1.5

2.9

47.2

35.8

Minor BPS

39.5

-0.7

2.1

56.22

45.1

Associated Gene:

Gene:

PPARGC1B

Ensembl Gene ID:

ENSAPLG00000009977

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020124

216171 - 255731

39561