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Intron Name: Anas_platyrhynchos_platyrhynchos_14_249854_250295_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

249854 - 250295

Intron Length:

442

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGGGG

5'SS Class:

strong_major

3'SS Sequence:

CCCTGCCTTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGTAAC

U12 Branch Point Sequence:

TCCGCTGTAACT

Flanking Amino Acid:

SQRCAPWQQAETPRCLMLSL

Intron Amino Acid Position:

580

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.7

0.77

0.9

63.9

42.4

Major BPS

62.2

0.3

1.2

38.7

Major PPT

76.6

0.6

0.8

72.4

32.3

Minor 5ss

23.2

-3.1

3.2

28.7

43.7

Minor BPS

51.2

0.11

2.1

70.57

Associated Gene:

Gene:

PPARGC1B

Ensembl Gene ID:

ENSAPLG00000009977

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046651

230173 - 255731

25559

ENSAPLT00000020124

216171 - 255731

39561

ENSAPLT00000010401

216171 - 255918

39748