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Intron Name: Anas_platyrhynchos_platyrhynchos_14_250333_250645_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

250333 - 250645

Intron Length:

313

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAC|GTAAGTGCA

5'SS Class:

major

3'SS Sequence:

CCTCCCCTTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTCAC

U12 Branch Point Sequence:

TTCACCTACACA

Flanking Amino Acid:

PRCLMLSLAQTDPTFGKRNF

Intron Amino Acid Position:

592

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.8

0.68

1.3

35.3

Major BPS

74.9

0.62

1.1

77.4

37.4

Major PPT

80.2

0.68

0.7

76.6

25.4

Minor 5ss

34.4

-1.8

3.1

40.8

38.7

Minor BPS

49.9

-0

2.2

67.59

44.9

Associated Gene:

Gene:

PPARGC1B

Ensembl Gene ID:

ENSAPLG00000009977

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010401

216171 - 255918

39748

ENSAPLT00000046651

230173 - 255731

25559

ENSAPLT00000020124

216171 - 255731

39561