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Intron Name: Anas_platyrhynchos_platyrhynchos_14_250711_251114_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

250711 - 251114

Intron Length:

404

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGATGG

5'SS Class:

major

3'SS Sequence:

ACTTGGGTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTCAC

U12 Branch Point Sequence:

TGTTTGTTCACT

Flanking Amino Acid:

MLTVELCGTAGLTPPTTPPY

Intron Amino Acid Position:

614

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.2

0.69

63.4

43.8

Major BPS

74.9

0.62

1.1

77.4

37.4

Major PPT

70.5

0.46

65.4

Minor 5ss

35.9

-1.6

3.3

47.1

48.3

Minor BPS

52.4

0.16

2.4

79.89

42.3

Associated Gene:

Gene:

PPARGC1B

Ensembl Gene ID:

ENSAPLG00000009977

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046651

230173 - 255731

25559

ENSAPLT00000020124

216171 - 255731

39561

ENSAPLT00000010401

216171 - 255918

39748