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Intron Name: Anas_platyrhynchos_platyrhynchos_14_251881_252534_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

251881 - 252534

Intron Length:

654

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGGGTG

5'SS Class:

strong_major

3'SS Sequence:

TCGTGCTCCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGCTGAC

U12 Branch Point Sequence:

TCGTGCTCCACA

Flanking Amino Acid:

SRSPTSRRTFRCENGEQCQG

Intron Amino Acid Position:

869

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.6

0.74

69.5

41.1

Major BPS

49.4

-0

1.3

42.8

41.8

Major PPT

71.4

0.48

0.9

64.6

36.6

Minor 5ss

38.9

-1.2

3.6

54.5

49.7

Minor BPS

45.2

-0.3

2.3

58.89

46.9

Associated Gene:

Gene:

PPARGC1B

Ensembl Gene ID:

ENSAPLG00000009977

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046651

230173 - 255731

25559

ENSAPLT00000020124

216171 - 255731

39561

ENSAPLT00000010401

216171 - 255918

39748