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Intron Name: Anas_platyrhynchos_platyrhynchos_14_252611_253367_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

252611 - 253367

Intron Length:

757

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATC|GTAAGTGAG

5'SS Class:

major

3'SS Sequence:

TTGGTGCTGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGAGAC

U12 Branch Point Sequence:

GGAGCCTGAGAC

Flanking Amino Acid:

QLEKKREKAIGEGRVVYIRN

Intron Amino Acid Position:

895

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.2

0.48

1.3

41.1

Major BPS

46.7

-0.2

1.2

41.8

39.2

Major PPT

66.6

0.37

1.1

61.9

44.4

Minor 5ss

33.6

-1.9

3.2

40.7

40.1

Minor BPS

43.2

-0.5

1.8

47.66

40.8

Associated Gene:

Gene:

PPARGC1B

Ensembl Gene ID:

ENSAPLG00000009977

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046651

230173 - 255731

25559

ENSAPLT00000020124

216171 - 255731

39561

ENSAPLT00000010401

216171 - 255918

39748