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Intron Name: Anas_platyrhynchos_platyrhynchos_14_253490_253711_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

253490 - 253711

Intron Length:

222

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGTGGC

5'SS Class:

strong_major

3'SS Sequence:

TTTGGTTGCTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCCTGAT

U12 Branch Point Sequence:

GGAGCCTGATGC

Flanking Amino Acid:

VECQVLSRTNRGDKYGFITY

Intron Amino Acid Position:

935

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

67.2

38.1

Major BPS

0.27

1.3

53.3

44.2

Major PPT

74.4

0.55

72.8

42.2

Minor 5ss

26.2

-2.7

3.2

34.3

Minor BPS

41.4

-0.6

45.75

42.3

Associated Gene:

Gene:

PPARGC1B

Ensembl Gene ID:

ENSAPLG00000009977

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020124

216171 - 255731

39561

ENSAPLT00000010401

216171 - 255918

39748

ENSAPLT00000046651

230173 - 255731

25559