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Intron Name: Anas_platyrhynchos_platyrhynchos_14_2656173_2659649_F

Intron Information:

Intron Rank:

140599

Intron Class:

major

Intron Phase:

Intron Coordinates:

2656173 - 2659649

Intron Length:

3477

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGAATA

5'SS Class:

strong_major

3'SS Sequence:

CTGTGTTACTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTAAC

U12 Branch Point Sequence:

TCTGTGTTACTC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.2

0.85

0.9

82.6

29.6

Major BPS

69.4

0.48

1.1

69.6

35.5

Major PPT

71.2

0.48

69.3

40.9

Minor 5ss

37.2

-1.4

46.4

Minor BPS

44.3

-0.4

2.3

56.43

43.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025699

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039274

2619699 - 2659678

39980