Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_14_2773296_2773373_F

Intron Information:

Intron Rank:

149427

Intron Class:

major

Intron Phase:

Intron Coordinates:

2773296 - 2773373

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTGTC

5'SS Class:

strong_major

3'SS Sequence:

AATCCTCCTCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTAAAA

U12 Branch Point Sequence:

CATGGATTAAAA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.7

1.01

0.7

84.8

25.1

Major BPS

64.3

0.36

71.3

30.3

Major PPT

69.2

0.43

0.8

59.8

37.1

Minor 5ss

31.8

-2.1

3.3

42.9

44.7

Minor BPS

44.3

-0.4

2.1

54.78

43.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030404

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044089

2772941 - 2773808

868