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Intron Name: Anas_platyrhynchos_platyrhynchos_14_2861183_2861408_R

Intron Information:

Intron Rank:

129772

Intron Class:

major

Intron Phase:

Intron Coordinates:

2861183 - 2861408

Intron Length:

226

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGTAAA

5'SS Class:

strong_major

3'SS Sequence:

TTTGTCTTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAGTGAA

U12 Branch Point Sequence:

TGAAAGTGAATG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

97.9

1.13

0.6

92.3

16.1

Major BPS

55.5

0.14

1.1

47.1

37.9

Major PPT

88.8

0.87

0.7

36.6

Minor 5ss

-1.7

2.7

41.8

44.8

Minor BPS

39.9

-0.9

2.2

44.06

41.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017005

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037980

2860298 - 2862870

2573