Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_14_291907_294259_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

291907 - 294259

Intron Length:

2353

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGAGAG

5'SS Class:

strong_major

3'SS Sequence:

TGATTCCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCTAAT

U12 Branch Point Sequence:

GGATCCTAATCT

Flanking Amino Acid:

TMTFIAGVYQVAMGFFQVGF

Intron Amino Acid Position:

219

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.6

0.84

0.8

71.2

34.6

Major BPS

81.9

0.79

0.9

80.1

Major PPT

80.1

0.68

0.9

73.9

36.5

Minor 5ss

24.3

-3

3.1

28.4

43.8

Minor BPS

52.7

0.16

70.64

45.6

Associated Gene:

Gene:

SLC26A2

Ensembl Gene ID:

ENSAPLG00000009889

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010286

285759 - 295765

10007