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Intron Name: Anas_platyrhynchos_platyrhynchos_14_3086290_3086985_F

Intron Information:

Intron Rank:

126876

Intron Class:

major

Intron Phase:

Intron Coordinates:

3086290 - 3086985

Intron Length:

696

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

CTGTGTTTTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTTAATGAACT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.4

0.83

75.2

36.3

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

81.8

0.71

0.9

75.6

38.3

Minor 5ss

33.5

-1.9

3.1

36.8

40.4

Minor BPS

0.49

1.9

87.84

36.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018350

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033750

3030339 - 3087110

56772

ENSAPLT00000017394

2956857 - 3087110

130254