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Intron Name: Anas_platyrhynchos_platyrhynchos_14_309650_310834_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

309650 - 310834

Intron Length:

1185

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

ACG|GCAGCACTG

5'SS Class:

weak_major

3'SS Sequence:

TTGGCCATCATAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTCAC

U12 Branch Point Sequence:

TTGGCCATCATA

Flanking Amino Acid:

RHLQLAGYNDVPVKELNDRC

Intron Amino Acid Position:

182

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

56.8

0.16

1.4

50.1

46.1

Major BPS

69.8

0.49

1.1

71.3

36.7

Major PPT

0.34

0.9

58.5

37.1

Minor 5ss

29.9

-2.3

4.4

47.7

47.9

Minor BPS

47.6

-0.1

2.1

63.66

43.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027437

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025823

309106 - 312211

3106