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Intron Name: Anas_platyrhynchos_platyrhynchos_14_3418180_3422101_F

Intron Information:

Intron Rank:

142228

Intron Class:

major

Intron Phase:

Intron Coordinates:

3418180 - 3422101

Intron Length:

3922

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATGGTT

5'SS Class:

strong_major

3'SS Sequence:

TTCTGTCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAATGAA

U12 Branch Point Sequence:

GTCACATCAAAT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.8

0.75

78.8

35.1

Major BPS

67.7

0.44

38.9

Major PPT

86.9

0.83

0.7

84.6

30.4

Minor 5ss

35.2

-1.7

3.8

55.5

48.6

Minor BPS

46.8

-0.1

1.9

64.93

44.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026586

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031856

3243795 - 3422249

178455