Gene Search

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3995841 - 4045032

Intron Length:

49192

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGAAAA

5'SS Class:

strong_major

3'SS Sequence:

TTCTCCATTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTGAT

U12 Branch Point Sequence:

TCTTTCTCCATT

Flanking Amino Acid:

CSGPQQASSSGPSNHHSQST

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.1

0.83

0.9

78.7

29.9

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

84.2

0.77

0.8

81.7

28.6

Minor 5ss

32.9

-1.9

2.9

37.3

41.2

Minor BPS

53.1

0.18

75.15

42.4

Associated Gene:

Gene:

TENM2

Ensembl Gene ID:

ENSAPLG00000003760

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023581

3590967 - 4212991

622025

ENSAPLT00000034465

3615953 - 4212991

597039

ENSAPLT00000044052

3550485 - 4212991

662507

ENSAPLT00000003986

3864620 - 4212991

348372

ENSAPLT00000033019

3615953 - 4212991

597039

ENSAPLT00000043924

3550485 - 4212991

662507

ENSAPLT00000027758

3864620 - 4212991

348372

ENSAPLT00000043087

3908343 - 4212991

304649

ENSAPLT00000027261

3541174 - 4212991

671818

ENSAPLT00000043044

3808693 - 4212991

404299

Intron Name: Anas_platyrhynchos_platyrhynchos_14_3995841_4045032_F

Intron Information:

Sequence Information:

Site Scores:

Associated Gene:

Associated Transcripts: