Gene Search

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4045268 - 4058306

Intron Length:

13039

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGTCAC

5'SS Class:

strong_major

3'SS Sequence:

TTTTGTTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

GTGTTTTAAACT

Flanking Amino Acid:

VLNSNVPLETRHFLFKTSSG

Intron Amino Acid Position:

164

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.4

0.72

68.4

38.7

Major BPS

90.4

0.7

90.2

19.3

Major PPT

93.6

0.98

0.7

92.3

26.6

Minor 5ss

27.7

-2.6

34.2

Minor BPS

0.42

1.7

75.57

41.7

Associated Gene:

Gene:

TENM2

Ensembl Gene ID:

ENSAPLG00000003760

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003986

3864620 - 4212991

348372

ENSAPLT00000033019

3615953 - 4212991

597039

ENSAPLT00000043924

3550485 - 4212991

662507

ENSAPLT00000027758

3864620 - 4212991

348372

ENSAPLT00000043087

3908343 - 4212991

304649

ENSAPLT00000027261

3541174 - 4212991

671818

ENSAPLT00000043044

3808693 - 4212991

404299

ENSAPLT00000023581

3590967 - 4212991

622025

ENSAPLT00000034465