Gene Search

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4101137 - 4108930

Intron Length:

7794

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACTTTAT

5'SS Class:

major

3'SS Sequence:

TTCTACTTTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTCTAC

U12 Branch Point Sequence:

TTTTTTCTACTT

Flanking Amino Acid:

RRGLPPSHAQYDFMERLDGK

Intron Amino Acid Position:

354

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.66

34.2

Major BPS

63.9

0.35

1.3

64.5

42.5

Major PPT

0.81

0.8

80.6

Minor 5ss

40.9

-1

3.1

58.4

46.1

Minor BPS

54.5

0.22

1.9

79.49

37.4

Associated Gene:

Gene:

TENM2

Ensembl Gene ID:

ENSAPLG00000003760

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023581

3590967 - 4212991

622025

ENSAPLT00000034465

3615953 - 4212991

597039

ENSAPLT00000044052

3550485 - 4212991

662507

ENSAPLT00000003986

3864620 - 4212991

348372

ENSAPLT00000033019

3615953 - 4212991

597039

ENSAPLT00000043924

3550485 - 4212991

662507

ENSAPLT00000027758

3864620 - 4212991

348372

ENSAPLT00000043087

3908343 - 4212991

304649

ENSAPLT00000027261

3541174 - 4212991

671818

ENSAPLT00000043044

3808693 - 4212991

404299

Intron Name: Anas_platyrhynchos_platyrhynchos_14_4101137_4108930_F

Intron Information:

Sequence Information:

Site Scores:

Associated Gene:

Associated Transcripts: