Gene Search

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4135232 - 4136804

Intron Length:

1573

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGAAGA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCCTCCTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTGTAAT

U12 Branch Point Sequence:

CTAGCTGTAATC

Flanking Amino Acid:

PNWMGPDCSVEVCSVDCGTH

Intron Amino Acid Position:

585

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.5

0.79

0.9

73.5

37.2

Major BPS

72.1

0.55

1.2

73.3

39.1

Major PPT

84.1

0.77

0.7

77.9

30.9

Minor 5ss

-1.9

2.9

37.4

41.9

Minor BPS

47.6

-0.2

2.1

58.02

41.9

Associated Gene:

Gene:

TENM2

Ensembl Gene ID:

ENSAPLG00000003760

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027261

3541174 - 4212991

671818

ENSAPLT00000043044

3808693 - 4212991

404299

ENSAPLT00000023581

3590967 - 4212991

622025

ENSAPLT00000034465

3615953 - 4212991

597039

ENSAPLT00000044052

3550485 - 4212991

662507

ENSAPLT00000003986

3864620 - 4212991

348372

ENSAPLT00000033019

3615953 - 4212991

597039

ENSAPLT00000043924

3550485 - 4212991

662507

ENSAPLT00000027758

3864620 - 4212991

348372

ENSAPLT00000043087

3908343 - 4212991

304649

Intron Name: Anas_platyrhynchos_platyrhynchos_14_4135232_4136804_F

Intron Information:

Sequence Information:

Site Scores:

Associated Gene:

Associated Transcripts: