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Intron Name: Anas_platyrhynchos_platyrhynchos_14_4136991_4164012_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4136991 - 4164012

Intron Length:

27022

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAGGCAAA

5'SS Class:

major

3'SS Sequence:

TTTCTTCAACCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTCAA

U12 Branch Point Sequence:

ATTTCTTCAACC

Flanking Amino Acid:

EGWNGEHCTIDGCPDLCNGN

Intron Amino Acid Position:

827

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.3

0.55

1.1

66.8

40.3

Major BPS

78.2

0.7

79.9

32.6

Major PPT

76.6

0.6

0.9

71.4

38.6

Minor 5ss

37.4

-1.4

3.1

44.4

45.6

Minor BPS

73.6

0.72

1.4

81.18

32.8

Associated Gene:

Gene:

TENM2

Ensembl Gene ID:

ENSAPLG00000003760

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034465

3615953 - 4212991

597039

ENSAPLT00000044052

3550485 - 4212991

662507

ENSAPLT00000033019

3615953 - 4212991

597039

ENSAPLT00000043924

3550485 - 4212991

662507

ENSAPLT00000027758

3864620 - 4212991

348372

ENSAPLT00000043087

3908343 - 4212991

304649

ENSAPLT00000027261

3541174 - 4212991

671818

ENSAPLT00000043044

3808693 - 4212991

404299