Gene Search

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4164160 - 4174352

Intron Length:

10193

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGCGAA

5'SS Class:

strong_major

3'SS Sequence:

TCTTACCTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTGAT

U12 Branch Point Sequence:

TGTTTCTTACCT

Flanking Amino Acid:

SCADNKDNEGDGLVDCLDPD

Intron Amino Acid Position:

705

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.3

0.83

0.9

73.7

32.5

Major BPS

83.8

0.84

73.6

41.8

Major PPT

84.6

0.78

0.8

81.3

30.3

Minor 5ss

30.2

-2.3

3.3

37.1

47.5

Minor BPS

73.6

0.82

1.6

88.23

36.9

Associated Gene:

Gene:

TENM2

Ensembl Gene ID:

ENSAPLG00000003760

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027758

3864620 - 4212991

348372

ENSAPLT00000043087

3908343 - 4212991

304649

ENSAPLT00000027261

3541174 - 4212991

671818

ENSAPLT00000043044

3808693 - 4212991

404299

ENSAPLT00000023581

3590967 - 4212991

622025

ENSAPLT00000034465

3615953 - 4212991

597039

ENSAPLT00000044052

3550485 - 4212991

662507

ENSAPLT00000003986