Gene Search

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4177596 - 4179073

Intron Length:

1478

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAC|GTGAGTTTG

5'SS Class:

major

3'SS Sequence:

CATGTTTTTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATAAAT

U12 Branch Point Sequence:

TCACCTATAAAT

Flanking Amino Acid:

YGYTITRQDGTFDLVANGGA

Intron Amino Acid Position:

815

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.7

0.61

1.3

74.8

38.1

Major BPS

74.5

0.61

79.6

29.1

Major PPT

77.4

0.62

0.9

69.5

41.3

Minor 5ss

39.7

-1.1

2.9

48.5

41.2

Minor BPS

50.9

0.11

1.7

68.74

41.6

Associated Gene:

Gene:

TENM2

Ensembl Gene ID:

ENSAPLG00000003760

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027261

3541174 - 4212991

671818

ENSAPLT00000043044

3808693 - 4212991

404299

ENSAPLT00000044052

3550485 - 4212991

662507

ENSAPLT00000023581

3590967 - 4212991

622025

ENSAPLT00000034465

3615953 - 4212991

597039

ENSAPLT00000043924

3550485 - 4212991

662507

ENSAPLT00000003986

3864620 - 4212991

348372

ENSAPLT00000033019

3615953 - 4212991

597039

ENSAPLT00000027758

3864620 - 4212991

348372

ENSAPLT00000043087

3908343 - 4212991

304649

Intron Name: Anas_platyrhynchos_platyrhynchos_14_4177596_4179073_F

Intron Information:

Sequence Information:

Site Scores:

Associated Gene:

Associated Transcripts: