Gene Search

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4179336 - 4180033

Intron Length:

698

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGAATA

5'SS Class:

strong_major

3'SS Sequence:

TTTTCCTATTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTGAT

U12 Branch Point Sequence:

TTTTTCCTATTC

Flanking Amino Acid:

GRNPIVPETQVLHEEIEIPG

Intron Amino Acid Position:

903

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.1

1.04

0.7

89.9

22.1

Major BPS

78.6

0.71

1.2

71.4

45.1

Major PPT

86.8

0.83

0.8

85.7

27.7

Minor 5ss

37.1

-1.5

48.8

46.9

Minor BPS

0.2

1.9

74.44

36.6

Associated Gene:

Gene:

TENM2

Ensembl Gene ID:

ENSAPLG00000003760

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027261

3541174 - 4212991

671818

ENSAPLT00000043044

3808693 - 4212991

404299

ENSAPLT00000044052

3550485 - 4212991

662507

ENSAPLT00000023581

3590967 - 4212991

622025

ENSAPLT00000034465

3615953 - 4212991

597039

ENSAPLT00000043924

3550485 - 4212991

662507

ENSAPLT00000003986

3864620 - 4212991

348372

ENSAPLT00000033019

3615953 - 4212991

597039

ENSAPLT00000027758

3864620 - 4212991

348372

ENSAPLT00000043087

3908343 - 4212991

304649

Intron Name: Anas_platyrhynchos_platyrhynchos_14_4179336_4180033_F

Intron Information:

Sequence Information:

Site Scores:

Associated Gene:

Associated Transcripts: