Gene Search

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4180302 - 4181455

Intron Length:

1154

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGTCAG

5'SS Class:

strong_major

3'SS Sequence:

ATTTTTTTTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTATTTTTATTT

Flanking Amino Acid:

QKVYGLSDAVVSVGFEYETC

Intron Amino Acid Position:

992

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.6

1.03

0.8

77.9

38.6

Major BPS

96.5

1.15

0.6

34.2

Major PPT

93.9

0.99

0.6

92.8

24.8

Minor 5ss

33.6

-1.9

2.9

40.4

45.7

Minor BPS

64.7

0.54

1.5

79.8

36.8

Associated Gene:

Gene:

TENM2

Ensembl Gene ID:

ENSAPLG00000003760

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027758

3864620 - 4212991

348372

ENSAPLT00000043087

3908343 - 4212991

304649

ENSAPLT00000027261

3541174 - 4212991

671818

ENSAPLT00000043044

3808693 - 4212991

404299

ENSAPLT00000023581

3590967 - 4212991

622025

ENSAPLT00000034465

3615953 - 4212991

597039

ENSAPLT00000044052

3550485 - 4212991

662507

ENSAPLT00000003986