Gene Search

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4181600 - 4183155

Intron Length:

1556

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTGAGTTAG

5'SS Class:

strong_major

3'SS Sequence:

TGTCTGTTATTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAATAAC

U12 Branch Point Sequence:

ATGACTGTAATA

Flanking Amino Acid:

DKHHVLNVKSGILHKGNGEN

Intron Amino Acid Position:

1040

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.4

0.79

0.9

72.8

34.5

Major BPS

70.1

0.5

70.3

31.9

Major PPT

71.2

0.48

70.6

39.9

Minor 5ss

34.2

-1.8

2.8

41.8

Minor BPS

49.2

-0

61.85

Associated Gene:

Gene:

TENM2

Ensembl Gene ID:

ENSAPLG00000003760

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003986

3864620 - 4212991

348372

ENSAPLT00000033019

3615953 - 4212991

597039

ENSAPLT00000043924

3550485 - 4212991

662507

ENSAPLT00000027758

3864620 - 4212991

348372

ENSAPLT00000043087

3908343 - 4212991

304649

ENSAPLT00000027261

3541174 - 4212991

671818

ENSAPLT00000043044

3808693 - 4212991

404299

ENSAPLT00000023581

3590967 - 4212991

622025

ENSAPLT00000034465