Gene Search

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4190615 - 4192118

Intron Length:

1504

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAACGTAG

5'SS Class:

major

3'SS Sequence:

TTCATACTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TTTTTCATACTT

Flanking Amino Acid:

AVDATLMSPRGIAVDKYGLM

Intron Amino Acid Position:

1201

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.7

0.61

1.2

66.6

41.6

Major BPS

100

1.24

0.5

100

Major PPT

80.2

0.68

0.9

73.8

35.6

Minor 5ss

41.6

-0.9

3.2

49.2

Minor BPS

60.6

0.41

1.9

84.17

Associated Gene:

Gene:

TENM2

Ensembl Gene ID:

ENSAPLG00000003760

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027758

3864620 - 4212991

348372

ENSAPLT00000043087

3908343 - 4212991

304649

ENSAPLT00000027261

3541174 - 4212991

671818

ENSAPLT00000043044

3808693 - 4212991

404299

ENSAPLT00000023581

3590967 - 4212991

622025

ENSAPLT00000034465

3615953 - 4212991

597039

ENSAPLT00000044052

3550485 - 4212991

662507

ENSAPLT00000003986