Gene Search

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

4192274 - 4192765

Intron Length:

492

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGACTCT

5'SS Class:

major

3'SS Sequence:

GTGCAACTCATAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TAATAAT

U12 Branch Point Sequence:

TTTACAGTAATA

Flanking Amino Acid:

SCDSSMDVSQVRLEWPTDLA

Intron Amino Acid Position:

1253

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.2

0.5

1.1

65.7

Major BPS

0.75

78.6

Major PPT

58.8

0.2

0.9

50.7

38.1

Minor 5ss

44.4

-0.6

3.3

65.3

46.1

Minor BPS

51.5

0.04

2.3

73.33

38.5

Associated Gene:

Gene:

TENM2

Ensembl Gene ID:

ENSAPLG00000003760

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023581

3590967 - 4212991

622025

ENSAPLT00000034465

3615953 - 4212991

597039

ENSAPLT00000044052

3550485 - 4212991

662507

ENSAPLT00000003986

3864620 - 4212991

348372

ENSAPLT00000033019

3615953 - 4212991

597039

ENSAPLT00000043924

3550485 - 4212991

662507

ENSAPLT00000027758

3864620 - 4212991

348372

ENSAPLT00000043087

3908343 - 4212991

304649

ENSAPLT00000027261

3541174 - 4212991

671818

ENSAPLT00000043044

3808693 - 4212991

404299

Intron Name: Anas_platyrhynchos_platyrhynchos_14_4192274_4192765_F

Intron Information:

Sequence Information:

Site Scores:

Associated Gene:

Associated Transcripts: