Gene Search

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4199085 - 4200679

Intron Length:

1595

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACCAAAG

5'SS Class:

major

3'SS Sequence:

ATTATTGCTGTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TTTTCATTATTG

Flanking Amino Acid:

SVEASYTVVQDQVRNSYQLC

Intron Amino Acid Position:

1603

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.1

0.43

1.2

62.7

43.6

Major BPS

100

1.24

0.5

100

Major PPT

72.5

0.51

0.9

66.8

39.8

Minor 5ss

37.3

-1.4

3.1

48.6

47.1

Minor BPS

61.4

0.22

1.9

72.56

40.4

Associated Gene:

Gene:

TENM2

Ensembl Gene ID:

ENSAPLG00000003760

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027758

3864620 - 4212991

348372

ENSAPLT00000043087

3908343 - 4212991

304649

ENSAPLT00000027261

3541174 - 4212991

671818

ENSAPLT00000043044

3808693 - 4212991

404299

ENSAPLT00000023581

3590967 - 4212991

622025

ENSAPLT00000034465

3615953 - 4212991

597039

ENSAPLT00000044052

3550485 - 4212991

662507

ENSAPLT00000003986