Gene Search

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4208368 - 4210949

Intron Length:

2582

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGACTT

5'SS Class:

strong_major

3'SS Sequence:

TTTTGATTTTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

TATTTCTCACTT

Flanking Amino Acid:

NELDLKNYVTDVKSWLVMFG

Intron Amino Acid Position:

2319

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.9

0.8

80.6

33.8

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

83.8

0.76

0.8

82.1

34.6

Minor 5ss

32.5

-2

3.3

47.4

Minor BPS

56.9

0.29

1.8

76.85

40.1

Associated Gene:

Gene:

TENM2

Ensembl Gene ID:

ENSAPLG00000003760

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003986

3864620 - 4212991

348372

ENSAPLT00000033019

3615953 - 4212991

597039

ENSAPLT00000043924

3550485 - 4212991

662507

ENSAPLT00000027758

3864620 - 4212991

348372

ENSAPLT00000043087

3908343 - 4212991

304649

ENSAPLT00000027261

3541174 - 4212991

671818

ENSAPLT00000043044

3808693 - 4212991

404299

ENSAPLT00000023581

3590967 - 4212991

622025

ENSAPLT00000034465