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Intron Name: Anas_platyrhynchos_platyrhynchos_14_4259588_4260868_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4259588 - 4260868

Intron Length:

1281

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCT|GTGAGTATT

5'SS Class:

major

3'SS Sequence:

TGTTTTGTTCTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGGTAAA

U12 Branch Point Sequence:

AAGCCGCTAAAT

Flanking Amino Acid:

WEHKLGSQTSLLSGSSSSSK

Intron Amino Acid Position:

136

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.4

0.58

80.3

34.1

Major BPS

60.1

0.25

1.3

61.7

43.1

Major PPT

80.6

0.69

0.9

73.5

41.9

Minor 5ss

39.1

-1.2

3.1

61.3

Minor BPS

42.5

-0.4

2.3

59.56

42.9

Associated Gene:

Gene:

WWC1

Ensembl Gene ID:

ENSAPLG00000003449

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022170

4247824 - 4294415

46592

ENSAPLT00000018910

4240523 - 4294415

53893

ENSAPLT00000018323

4252691 - 4294657

41967

ENSAPLT00000003530

4235576 - 4294957

59382

ENSAPLT00000043798

4223503 - 4294415

70913