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Intron Name: Anas_platyrhynchos_platyrhynchos_14_4261940_4262834_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4261940 - 4262834

Intron Length:

895

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAAGTCTG

5'SS Class:

strong_major

3'SS Sequence:

AATTTCCATACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTTTTTTAATT

Flanking Amino Acid:

YKEHGFQTLKKIDMKMSDTQ

Intron Amino Acid Position:

188

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.6

0.81

0.9

75.5

40.6

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

73.8

0.54

66.9

38.8

Minor 5ss

39.5

-1.2

50.7

39.9

Minor BPS

84.9

1.17

0.8

94.97

24.6

Associated Gene:

Gene:

WWC1

Ensembl Gene ID:

ENSAPLG00000003449

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018910

4240523 - 4294415

53893

ENSAPLT00000018323

4252691 - 4294657

41967

ENSAPLT00000003530

4235576 - 4294957

59382

ENSAPLT00000043798

4223503 - 4294415

70913

ENSAPLT00000022170

4247824 - 4294415

46592