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Intron Name: Anas_platyrhynchos_platyrhynchos_14_4263684_4264733_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4263684 - 4264733

Intron Length:

1050

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAC|GTAAGTAAA

5'SS Class:

strong_major

3'SS Sequence:

TATTTTGTCTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACTTCAT

U12 Branch Point Sequence:

AGTTGCTGACTT

Flanking Amino Acid:

VSSQTDVSGNFITSSNNQLA

Intron Amino Acid Position:

281

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

1.2

83.2

30.8

Major BPS

78.6

0.71

79.6

32.9

Major PPT

82.3

0.73

0.9

80.8

36.5

Minor 5ss

36.4

-1.5

2.7

41.6

38.3

Minor BPS

47.2

-0.1

2.1

67.9

43.1

Associated Gene:

Gene:

WWC1

Ensembl Gene ID:

ENSAPLG00000003449

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003530

4235576 - 4294957

59382

ENSAPLT00000043798

4223503 - 4294415

70913

ENSAPLT00000022170

4247824 - 4294415

46592

ENSAPLT00000018910

4240523 - 4294415

53893

ENSAPLT00000018323

4252691 - 4294657

41967