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Intron Name: Anas_platyrhynchos_platyrhynchos_14_4270220_4271616_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4270220 - 4271616

Intron Length:

1397

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGTTAC

5'SS Class:

strong_major

3'SS Sequence:

TCTTTCCTCTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTAAA

U12 Branch Point Sequence:

TACTTCAGATCT

Flanking Amino Acid:

RDTQSKALTERLKLNSKRNQ

Intron Amino Acid Position:

386

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.7

0.86

0.9

78.4

32.4

Major BPS

75.2

0.63

1.1

75.9

36.3

Major PPT

82.1

0.72

0.7

81.3

23.8

Minor 5ss

39.1

-1.2

3.1

51.5

45.7

Minor BPS

46.4

-0.1

1.9

66.7

43.6

Associated Gene:

Gene:

WWC1

Ensembl Gene ID:

ENSAPLG00000003449

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018910

4240523 - 4294415

53893

ENSAPLT00000018323

4252691 - 4294657

41967

ENSAPLT00000003530

4235576 - 4294957

59382

ENSAPLT00000043798

4223503 - 4294415

70913

ENSAPLT00000022170

4247824 - 4294415

46592