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Intron Name: Anas_platyrhynchos_platyrhynchos_14_4283039_4284886_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4283039 - 4284886

Intron Length:

1848

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGT|GTAAGTGGG

5'SS Class:

major

3'SS Sequence:

GGTTTTTCCGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTGAC

U12 Branch Point Sequence:

TAATACTGACTG

Flanking Amino Acid:

QALLSQQDQKVNIRVAVLPC

Intron Amino Acid Position:

688

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.7

0.51

1.1

44.9

Major BPS

73.6

0.59

0.9

63.3

35.6

Major PPT

74.4

0.55

0.8

69.8

36.6

Minor 5ss

34.1

-1.8

3.2

45.3

Minor BPS

45.7

-0.4

1.9

51.63

42.4

Associated Gene:

Gene:

WWC1

Ensembl Gene ID:

ENSAPLG00000003449

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022170

4247824 - 4294415

46592

ENSAPLT00000018910

4240523 - 4294415

53893

ENSAPLT00000018323

4252691 - 4294657

41967

ENSAPLT00000003530

4235576 - 4294957

59382

ENSAPLT00000043798

4223503 - 4294415

70913