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Intron Name: Anas_platyrhynchos_platyrhynchos_14_4295332_4297582_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4295332 - 4297582

Intron Length:

2251

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGCGGGGG

5'SS Class:

major

3'SS Sequence:

ATTTGCTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTAAT

U12 Branch Point Sequence:

GTCCATTTAATT

Flanking Amino Acid:

AEAVARLGRQENEIKLLTAE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.54

1.1

44.1

Major BPS

90.7

1.01

0.7

19.9

Major PPT

84.8

0.78

0.8

81.6

35.5

Minor 5ss

22.1

-3.2

3.4

28.8

43.7

Minor BPS

58.4

0.34

1.5

70.98

40.2

Associated Gene:

Gene:

RARS1

Ensembl Gene ID:

ENSAPLG00000002426

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019512

4294349 - 4307678

13330

ENSAPLT00000002505

4294349 - 4307959

13611