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Intron Name: Anas_platyrhynchos_platyrhynchos_14_4297718_4298049_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4297718 - 4298049

Intron Length:

332

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGGAA

5'SS Class:

strong_major

3'SS Sequence:

TTTGCTCTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCTCAC

U12 Branch Point Sequence:

TGCTCCTCACAC

Flanking Amino Acid:

LKYRLNFLRKSLQEERSKTA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.94

0.8

78.3

31.1

Major BPS

72.4

0.56

73.5

32.5

Major PPT

87.6

0.84

0.7

85.1

29.7

Minor 5ss

28.5

-2.5

3.5

37.1

47.5

Minor BPS

48.5

-0.1

1.9

60.74

44.1

Associated Gene:

Gene:

RARS1

Ensembl Gene ID:

ENSAPLG00000002426

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019512

4294349 - 4307678

13330

ENSAPLT00000002505

4294349 - 4307959

13611