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Intron Name: Anas_platyrhynchos_platyrhynchos_14_4298239_4300120_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4298239 - 4300120

Intron Length:

1882

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAATCTG

5'SS Class:

strong_major

3'SS Sequence:

TGTTGTATTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTTAC

U12 Branch Point Sequence:

TTTTACTGGATC

Flanking Amino Acid:

QCNSAMGITQILLKTKEQKV

Intron Amino Acid Position:

124

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.3

0.83

0.9

75.1

41.1

Major BPS

77.8

0.69

0.9

69.4

37.3

Major PPT

81.3

0.7

0.9

78.1

40.1

Minor 5ss

37.2

-1.4

3.1

49.5

46.7

Minor BPS

60.9

0.33

1.7

75.61

34.6

Associated Gene:

Gene:

RARS1

Ensembl Gene ID:

ENSAPLG00000002426

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019512

4294349 - 4307678

13330

ENSAPLT00000002505

4294349 - 4307959

13611