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Intron Name: Anas_platyrhynchos_platyrhynchos_14_4300233_4301162_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4300233 - 4301162

Intron Length:

930

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTACGGTAC

5'SS Class:

major

3'SS Sequence:

TTCTCCTCCAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CACTCAT

U12 Branch Point Sequence:

TTCTCCTCCAAA

Flanking Amino Acid:

CIEKVEIAGPGFINVHLRKD

Intron Amino Acid Position:

161

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.7

0.54

1.1

62.9

38.2

Major BPS

74.8

0.62

0.9

75.3

29.7

Major PPT

69.8

0.45

70.8

27.7

Minor 5ss

36.1

-1.6

3.5

46.1

44.8

Minor BPS

50.2

-0

2.1

68.84

43.3

Associated Gene:

Gene:

RARS1

Ensembl Gene ID:

ENSAPLG00000002426

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019512

4294349 - 4307678

13330

ENSAPLT00000002505

4294349 - 4307959

13611