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Intron Name: Anas_platyrhynchos_platyrhynchos_14_4301684_4302011_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4301684 - 4302011

Intron Length:

328

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGAGCT

5'SS Class:

strong_major

3'SS Sequence:

TAATTGCTTCAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTAAT

U12 Branch Point Sequence:

TTCTCTTTAATT

Flanking Amino Acid:

LFEFAGYDVLRLNHLGDWGT

Intron Amino Acid Position:

235

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.3

0.88

0.8

77.7

30.1

Major BPS

87.2

0.92

0.9

87.6

25.6

Major PPT

64.4

0.32

1.1

44.5

Minor 5ss

27.6

-2.6

3.3

39.2

46.2

Minor BPS

83.8

1.14

91.31

32.6

Associated Gene:

Gene:

RARS1

Ensembl Gene ID:

ENSAPLG00000002426

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019512

4294349 - 4307678

13330

ENSAPLT00000002505

4294349 - 4307959

13611