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Intron Name: Anas_platyrhynchos_platyrhynchos_14_4302549_4302888_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4302549 - 4302888

Intron Length:

340

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGACTTTG

5'SS Class:

major

3'SS Sequence:

TTCCCTCCTCAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTAAT

U12 Branch Point Sequence:

AGTACTTTCATC

Flanking Amino Acid:

WELICDVSRKEFQKIYNCLD

Intron Amino Acid Position:

319

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.8

0.68

1.1

74.8

38.1

Major BPS

90.7

1.01

0.7

19.9

Major PPT

70.2

0.45

32.5

Minor 5ss

43.9

-0.7

2.8

57.8

46.8

Minor BPS

51.2

0.02

1.7

61.97

37.7

Associated Gene:

Gene:

RARS1

Ensembl Gene ID:

ENSAPLG00000002426

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019512

4294349 - 4307678

13330

ENSAPLT00000002505

4294349 - 4307959

13611