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Intron Name: Anas_platyrhynchos_platyrhynchos_14_4304549_4305379_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4304549 - 4305379

Intron Length:

831

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGTCTC

5'SS Class:

strong_major

3'SS Sequence:

TGTGTGTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGGTCAT

U12 Branch Point Sequence:

GCCTCTTACACA

Flanking Amino Acid:

AAFGVVLGEDKKKFKTRSGD

Intron Amino Acid Position:

450

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.6

0.84

0.9

35.3

Major BPS

69.7

0.49

1.3

71.4

45.1

Major PPT

80.5

0.69

0.9

76.9

42.1

Minor 5ss

40.5

-1.1

Minor BPS

46.4

-0.2

2.1

54.83

44.6

Associated Gene:

Gene:

RARS1

Ensembl Gene ID:

ENSAPLG00000002426

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019512

4294349 - 4307678

13330

ENSAPLT00000002505

4294349 - 4307959

13611