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Intron Name: Anas_platyrhynchos_platyrhynchos_14_4305486_4306549_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

4305486 - 4306549

Intron Length:

1064

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGCTCAT

5'SS Class:

major

3'SS Sequence:

GAAATCGTAACAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTCTGAA

U12 Branch Point Sequence:

CTGTTCTGAAAT

Flanking Amino Acid:

DKLKDKERDKVLTAEELRAA

Intron Amino Acid Position:

486

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.6

0.53

1.2

68.8

43.8

Major BPS

82.1

0.8

71.6

36.4

Major PPT

0.11

1.1

47.3

44.3

Minor 5ss

-1.1

3.2

58.1

46.5

Minor BPS

59.3

0.37

1.6

73.59

43.1

Associated Gene:

Gene:

RARS1

Ensembl Gene ID:

ENSAPLG00000002426

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002505

4294349 - 4307959

13611

ENSAPLT00000019512

4294349 - 4307678

13330