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Intron Name: Anas_platyrhynchos_platyrhynchos_14_4306723_4307233_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4306723 - 4307233

Intron Length:

511

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGTTGA

5'SS Class:

strong_major

3'SS Sequence:

TGGCACACTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACACAC

U12 Branch Point Sequence:

GGGACCTTACAC

Flanking Amino Acid:

AYLLYAFTRIRAIARLANID

Intron Amino Acid Position:

543

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.3

0.74

71.1

37.5

Major BPS

0.25

66.9

29.8

Major PPT

64.2

0.32

55.7

39.7

Minor 5ss

32.7

-2

3.1

40.4

45.8

Minor BPS

48.1

-0.1

1.8

54.24

42.9

Associated Gene:

Gene:

RARS1

Ensembl Gene ID:

ENSAPLG00000002426

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019512

4294349 - 4307678

13330

ENSAPLT00000002505

4294349 - 4307959

13611