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Intron Name: Anas_platyrhynchos_platyrhynchos_14_4307434_4310296_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

4307434 - 4310296

Intron Length:

2863

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CTG|GCTGGAGTG

5'SS Class:

major

3'SS Sequence:

TCGTAGAACTCAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTCTCAA

U12 Branch Point Sequence:

TCCTTCTCAACG

Flanking Amino Acid:

AEVEVWLLGPVKVVASSYRI

Intron Amino Acid Position:

893

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.26

1.3

58.1

43.6

Major BPS

85.7

0.89

0.8

85.9

22.5

Major PPT

59.3

0.21

1.1

55.3

43.5

Minor 5ss

18.8

-3.6

27.1

37.8

Minor BPS

60.7

0.2

1.7

62.74

45.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000001119

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046063

4306979 - 4356583

49605

ENSAPLT00000033211

4306979 - 4321694

14716