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Intron Name: Anas_platyrhynchos_platyrhynchos_14_4307482_4307849_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4307482 - 4307849

Intron Length:

368

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTGAGTGTT

5'SS Class:

strong_major

3'SS Sequence:

GATGTTTTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCTTGAT

U12 Branch Point Sequence:

CCTACCTTGATG

Flanking Amino Acid:

CYCVEKDRQSGQIVKVNMWR

Intron Amino Acid Position:

626

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.3

0.85

0.8

83.1

28.6

Major BPS

71.5

0.53

1.1

43.2

Major PPT

79.6

0.67

0.9

73.2

41.7

Minor 5ss

33.3

-1.9

3.4

45.9

43.7

Minor BPS

60.4

0.18

1.5

58.75

43.6

Associated Gene:

Gene:

RARS1

Ensembl Gene ID:

ENSAPLG00000002426

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002505

4294349 - 4307959

13611