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Intron Name: Anas_platyrhynchos_platyrhynchos_14_4310623_4312285_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

4310623 - 4312285

Intron Length:

1663

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTATTGTCA

5'SS Class:

weak_major

3'SS Sequence:

TCCCCATCCACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTCAC

U12 Branch Point Sequence:

CTCTTGTTCACA

Flanking Amino Acid:

TLRRDSSSSTRLSQRKYSLG

Intron Amino Acid Position:

785

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

62.4

0.29

1.1

55.1

38.3

Major BPS

74.9

0.62

1.1

77.4

37.4

Major PPT

71.1

0.48

0.8

64.4

29.8

Minor 5ss

43.7

-0.7

56.8

47.5

Minor BPS

46.7

-0.2

2.4

61.69

45.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000001119

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046063

4306979 - 4356583

49605

ENSAPLT00000044380

4306979 - 4321911

14933

ENSAPLT00000033211

4306979 - 4321694

14716

ENSAPLT00000001157

4306979 - 4321911

14933