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Intron Name: Anas_platyrhynchos_platyrhynchos_14_4314342_4315052_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4314342 - 4315052

Intron Length:

711

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGTTGC

5'SS Class:

strong_major

3'SS Sequence:

TTTTTGTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAATAAG

U12 Branch Point Sequence:

GGGCTAATAAGG

Flanking Amino Acid:

YSPSSKQGWNWTIPKFIKKI

Intron Amino Acid Position:

593

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.2

0.88

0.9

74.9

36.2

Major BPS

56.1

0.15

1.6

64.3

39.7

Major PPT

93.6

0.98

0.7

92.3

26.6

Minor 5ss

40.7

-1

2.8

49.7

41.9

Minor BPS

37.5

-1

1.9

36.33

38.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000001119

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044380

4306979 - 4321911

14933

ENSAPLT00000033211

4306979 - 4321694

14716

ENSAPLT00000001157

4306979 - 4321911

14933

ENSAPLT00000046063

4306979 - 4356583

49605