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Intron Name: Anas_platyrhynchos_platyrhynchos_14_4405632_4407830_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4405632 - 4407830

Intron Length:

2199

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGCTTG

5'SS Class:

major

3'SS Sequence:

TCTCTTTCTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTAAAT

U12 Branch Point Sequence:

CAGCTCTAAATA

Flanking Amino Acid:

QEIGDPCLNHKCLHGKCMVA

Intron Amino Acid Position:

1125

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.8

0.7

72.5

39.9

Major BPS

69.8

0.49

1.1

75.5

35.2

Major PPT

87.8

0.85

0.7

80.6

31.5

Minor 5ss

49.2

-0

2.8

64.9

40.8

Minor BPS

48.3

-0.1

1.7

52.91

39.9

Associated Gene:

Gene:

SLIT3

Ensembl Gene ID:

ENSAPLG00000014516

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027194

4404413 - 4651834

247422

ENSAPLT00000015357

4404413 - 4651210

246798