Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_14_4493788_4493966_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4493788 - 4493966

Intron Length:

179

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACT|GTAAGTAGT

5'SS Class:

major

3'SS Sequence:

CATATTCTACCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

AGTGTTGTAACT

Flanking Amino Acid:

TFSNMTQLSTLILSYNRLRC

Intron Amino Acid Position:

553

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.61

1.1

75.1

40.8

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

70.9

0.47

63.1

42.6

Minor 5ss

40.4

-1.1

2.9

61.4

42.9

Minor BPS

49.2

0.02

2.1

69.96

41.5

Associated Gene:

Gene:

SLIT3

Ensembl Gene ID:

ENSAPLG00000014516

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015357

4404413 - 4651210

246798

ENSAPLT00000027194

4404413 - 4651834

247422